These are my notes in my attempt to compile CIVET (a version updated by Daan in February 2015) on a VM running CentOS 6.5:

1. When copying the code if links or files in the folder SRC are missing it is ok. You can ignore. All other soft links should be working though.

2. Need to make sure to source the init.sh file

source /quarantine/init.sh

3. For my installation I also needed to install Getopt:: Tabular from cpan

cpan
install Getopt::Tabular
quit

but that was before I sourced the init.sh file so that might not be necessary

4 Because the ssh connection times out, you should install and use screen to run CIVET

yum -y install screen

%%Might need to also run yum -y upgrade if you only need to upgrade

screen

Then run the program. If outside screen you can go back to screen by typing;

screen -r

Then based on the detached screens choose which one to attach:

screen -r xxxxx.penelope